4J3D date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 1JS, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceExploring the UDP pocket of LpxC through amino acid analogs., Hale MR, Hill P, Lahiri S, Miller MD, Ross P, Alm R, Gao N, Kutschke A, Johnstone M, Prince B, Thresher J, Yang W, Bioorg Med Chem Lett. 2013 Apr 15;23(8):2362-7. doi: 10.1016/j.bmcl.2013.02.055. , Epub 2013 Mar 1. PMID:23499237
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk]
  • Biological Unit Coordinates (4j3d.pdb1.gz) 49 Kb
  • Biological Unit Coordinates (4j3d.pdb2.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 4J3D
  • CSU: Contacts of Structural Units for 4J3D
  • Structure Factors (489 Kb)
  • Retrieve 4J3D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4J3D from S2C, [Save to disk]
  • Re-refined 4j3d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4J3D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4j3d] [4j3d_A] [4j3d_B]
  • SWISS-PROT database:

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