4J9D	Transferase Unknown Function	date	Feb 16, 2013
title	Crystal Structure Of The N114a Mutant Of The Abl-Sh3 Domain With The High Affinity Peptide P0
authors	A.Camara-Artigas
compound		source
Molecule: Tyrosine-Protein Kinase Abl1 Chain: A, C, E Fragment: Sh3 Domain (Unp Residues 60-121) Synonym: Abelson Murine Leukemia Viral Oncogene Homolog 1, Tyrosine-Protein Kinase 1, Proto-Oncogene C-Abl, P150; Ec: 2.7.10.2 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Abl, Abl1, Jtk7 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b
Molecule: P0 Chain: B, D, F Engineered: Yes		Synthetic: Yes Other_details: This Sequence Has Been Optimized To Increase Affinity
symmetry	Space Group: P 32 2 1	R_factor 0.143 R_Free 0.183
crystal cell	length a length b length c angle alpha angle beta angle gamma 86.380 86.380 44.950 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.50 Å
ligand	ACE, SO4	enzyme	Transferase E.C.2.7.10.2 BRENDA
Gene Ontology	Chain Function Process Component A, C, E
Primary reference	Role of interfacial water molecules in proline-rich ligand recognition by the Src homology 3 domain of Abl., Palencia A, Camara-Artigas A, Pisabarro MT, Martinez JC, Luque I, J Biol Chem. 2010 Jan 22;285(4):2823-33. Epub 2009 Nov 10. PMID:19906645

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk] Biological Unit Coordinates (4j9d.pdb1.gz) 33 Kb Biological Unit Coordinates (4j9d.pdb2.gz) 34 Kb Biological Unit Coordinates (4j9d.pdb3.gz) 35 Kb LPC: Ligand-Protein Contacts for 4J9D CSU: Contacts of Structural Units for 4J9D Structure Factors (209 Kb) Retrieve 4J9D in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4J9D from S2C, [Save to disk] Re-refined 4j9d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 4J9D

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 4J9D, from MSDmotif at EBI Fold representative 4j9d from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4j9d] [4j9d_B] [4j9d_A] [4j9d_C] [4j9d_E] [4j9d_D] [4j9d_F] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4J9D: [SH3 ] by SMART

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