4JG7 Structure of RSK2 CTD bound to 3-(3-(1H-pyrrolo[2,3-b]pyridine-3-carbonyl)phenyl)-2-cyanoacrylamide date
authors Miller, R.M., Paavilainen, V.O., Krishnan, S., Serafimova, I.M., Taunton, J.
compound source
symmetry
R_factor
R_Free 0.2979
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.00
ligand 1LC, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceElectrophilic fragment-based design of reversible covalent kinase inhibitors., Miller RM, Paavilainen VO, Krishnan S, Serafimova IM, Taunton J, J Am Chem Soc. 2013 Apr 10;135(14):5298-301. doi: 10.1021/ja401221b. Epub 2013, Mar 29. PMID:23540679
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk]
  • Biological Unit Coordinates (4jg7.pdb1.gz) 89 Kb
  • LPC: Ligand-Protein Contacts for 4JG7
  • CSU: Contacts of Structural Units for 4JG7
  • Structure Factors (138 Kb)
  • Retrieve 4JG7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4JG7 from S2C, [Save to disk]
  • Re-refined 4jg7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4JG7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4JG7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4JG7, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4jg7_A] [4jg7]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4JG7: [S_TKc ] by SMART
  • Other resources with information on 4JG7
  • Community annotation for 4JG7 at PDBWiki (http://pdbwiki.org)

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