4JHP The crystal structure of the RPGR RCC1-like domain in complex with PDE6D date 2013-03-05
authors Waetzlich, D., Vetter, I., Wittinghofer, A., Ismail, S.
compound source
symmetry
R_factor
R_Free 0.22128
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
Gene
Ontology
ChainFunctionProcessComponent
B
  • GTPase inhibitor activity


    • Primary referenceThe interplay between RPGR, PDEdelta and Arl2/3 regulate the ciliary targeting of farnesylated cargo., Watzlich D, Vetter I, Gotthardt K, Miertzschke M, Chen YX, Wittinghofer A, Ismail S, EMBO Rep. 2013 Apr 5. doi: 10.1038/embor.2013.37. PMID:23559067
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk]
  • Biological Unit Coordinates (4jhp.pdb1.gz) 86 Kb
  • CSU: Contacts of Structural Units for 4JHP
  • Structure Factors (366 Kb)
  • Retrieve 4JHP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4JHP from S2C, [Save to disk]
  • Re-refined 4jhp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4JHP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4JHP
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4JHP, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4jhp] [4jhp_B] [4jhp_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4JHP
  • Community annotation for 4JHP at PDBWiki (http://pdbwiki.org)

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