4JLH HIV-1 Integrase Catalytic Core Domain A128T Mutant Complexed with Allosteric Inhibitor date
authors Feng, L., Kvaratskhelia, M.
compound source
symmetry
R_factor
R_Free 0.2429
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.09
ligand 0L9, CAF, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe A128T resistance mutation reveals aberrant protein multimerization as the primary mechanism of action of allosteric HIV-1 integrase inhibitors., Feng L, Sharma A, Slaughter A, Jena N, Koh Y, Shkriabai N, Larue RC, Patel PA, Mitsuya H, Kessl JJ, Engelman A, Fuchs JR, Kvaratskhelia M, J Biol Chem. 2013 Apr 24. PMID:23615903
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (4jlh.pdb1.gz) 97 Kb
  • LPC: Ligand-Protein Contacts for 4JLH
  • CSU: Contacts of Structural Units for 4JLH
  • Structure Factors (152 Kb)
  • Retrieve 4JLH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4JLH from S2C, [Save to disk]
  • Re-refined 4jlh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4JLH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4JLH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4JLH, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4jlh] [4jlh_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4JLH
  • Community annotation for 4JLH at PDBWiki (http://pdbwiki.org)

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