4JNF Allosteric opening of the polypeptide-binding site when an Hsp70 binds ATP date
authors Qi, R., Sarbeng, E.B., Liu, Q., Le, K.Q., Xu, X., Xu, H., Yang, J., Wong, J.L., Vorvis, C., Hendrickson, W.A., Zhou, L., Liu, Q.
compound source
symmetry
R_factor
R_Free 0.2157
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.62
Primary referenceAllosteric opening of the polypeptide-binding site when an Hsp70 binds ATP., Qi R, Sarbeng EB, Liu Q, Le KQ, Xu X, Xu H, Yang J, Wong JL, Vorvis C, Hendrickson WA, Zhou L, Liu Q, Nat Struct Mol Biol. 2013 Jul;20(7):900-7. doi: 10.1038/nsmb.2583. Epub 2013 May , 26. PMID:23708608
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (4jnf.pdb1.gz) 73 Kb
  • CSU: Contacts of Structural Units for 4JNF
  • Structure Factors (240 Kb)
  • Retrieve 4JNF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4JNF from S2C, [Save to disk]
  • Re-refined 4jnf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4JNF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4JNF
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4JNF, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4jnf] [4jnf_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4JNF
  • Community annotation for 4JNF at PDBWiki (http://pdbwiki.org)

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