4JQD	Crystal structure of the Restriction-Modification Controller Protein C.Csp231I OL operator complex	date
authors	Shevtsov, M.B., Streeter, S.D., Thresh, S.J., McGeehan, J.E., Kneale, G.G.
compound		source
symmetry		R_factor R_Free 0.23532
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.75
Gene Ontology	Chain Function Process Component F, A, E, B
Primary reference	Structural analysis of DNA binding by C.Csp231I, a member of a novel class of R-M controller proteins regulating gene expression., Shevtsov MB, Streeter SD, Thresh SJ, Swiderska A, McGeehan JE, Kneale GG, Acta Crystallogr D Biol Crystallogr. 2015 Feb;71(Pt 2):398-407. doi:, 10.1107/S139900471402690X. Epub 2015 Jan 23. PMID:25664751

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (203 Kb) [Save to disk] Biological Unit Coordinates (4jqd.pdb1.gz) 100 Kb Biological Unit Coordinates (4jqd.pdb2.gz) 100 Kb CSU: Contacts of Structural Units for 4JQD Structure Factors (309 Kb) Retrieve 4JQD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4JQD from S2C, [Save to disk] Re-refined 4jqd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4JQD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4JQD

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4JQD, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4jqd] [4jqd_E] [4jqd_C] [4jqd_B] [4jqd_D] [4jqd_A] [4jqd_G] [4jqd_F] [4jqd_H] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4JQD: [HTH_XRE ] by SMART

Other resources with information on 4JQD

Community annotation for 4JQD at PDBWiki (http://pdbwiki.org)

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