4JWT Crystal structure of a putative 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Sulfurimonas denitrificans DSM 1251 (Target NYSGRC-029304 ) date
authors Sampathkumar, P., Almo, S.C., NYSGRC, New.York.Structural.Genomics.Research.Consortium.
compound source
symmetry
R_factor
R_Free 0.1929
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.05
ligand ADE, EDO, MSE enzyme
Gene SUDEN
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (4jwt.pdb1.gz) 83 Kb
  • LPC: Ligand-Protein Contacts for 4JWT
  • CSU: Contacts of Structural Units for 4JWT
  • Structure Factors (1061 Kb)
  • Retrieve 4JWT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4JWT from S2C, [Save to disk]
  • Re-refined 4jwt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4JWT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4JWT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4JWT, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4jwt_A] [4jwt]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4JWT
  • Community annotation for 4JWT at PDBWiki (http://pdbwiki.org)

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