4JZL Crystal structure of BAP31 vDED at alkaline pH date 2013-04-03
authors Quistgaard, E.M., Low, C., Moberg, P., Guettou, F., Maddi, K., Nordlund, P.
compound source
symmetry
R_factor
R_Free 0.2458
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.20
ligand GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructural and Biophysical Characterization of the Cytoplasmic Domains of Human BAP29 and BAP31., Quistgaard EM, Low C, Moberg P, Guettou F, Maddi K, Nordlund P, PLoS One. 2013;8(8):e71111. doi: 10.1371/journal.pone.0071111. PMID:23967155
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk]
  • Biological Unit Coordinates (4jzl.pdb1.gz) 42 Kb
  • Biological Unit Coordinates (4jzl.pdb2.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 4JZL
  • CSU: Contacts of Structural Units for 4JZL
  • Structure Factors (98 Kb)
  • Retrieve 4JZL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4JZL from S2C, [Save to disk]
  • Re-refined 4jzl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4JZL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4JZL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4JZL, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4jzl] [4jzl_B] [4jzl_C] [4jzl_D] [4jzl_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4JZL
  • Community annotation for 4JZL at PDBWiki (http://pdbwiki.org)

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