4K0K date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
B


C


D


E


F


G


H


I


J


K


L


M


N


O


P


Q


R


S


T


U


Primary referenceUnusual base pairing during the decoding of a stop codon by the ribosome., Fernandez IS, Ng CL, Kelley AC, Wu G, Yu YT, Ramakrishnan V, Nature. 2013 Jun 30. doi: 10.1038/nature12302. PMID:23812587
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1026 Kb) [Save to disk]
  • Biological Unit Coordinates (4k0k.pdb1.gz) 1019 Kb
  • CSU: Contacts of Structural Units for 4K0K
  • Structure Factors (3113 Kb)
  • Retrieve 4K0K in mmCIF format [Save to disk]
  • Re-refined 4k0k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4K0K in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4k0k] [4k0k_A] [4k0k_B] [4k0k_C] [4k0k_D] [4k0k_E] [4k0k_F] [4k0k_G] [4k0k_H] [4k0k_I] [4k0k_J] [4k0k_K] [4k0k_L] [4k0k_M] [4k0k_N] [4k0k_O] [4k0k_P] [4k0k_Q] [4k0k_R] [4k0k_S] [4k0k_T] [4k0k_U] [4k0k_X] [4k0k_Y]
  • SWISS-PROT database:
  • Domains found in 4K0K: [KH] [Ribosomal_S10] [Ribosomal_S15] [Ribosomal_S4] [S4 ] by SMART

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