OCA Atlas for 4K1G

4K1G

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

PEG, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, A	nuclease activity endonuclease activity

Primary reference

Insight into mechanisms of 3'-5' exonuclease activity and removal of bulky 8,5'-cyclopurine adducts by apurinic/apyrimidinic endonucleases., Mazouzi A, Vigouroux A, Aikeshev B, Brooks PJ, Saparbaev MK, Morera S, Ishchenko AA, Proc Natl Acad Sci U S A. 2013 Aug 13;110(33):E3071-80. doi:, 10.1073/pnas.1305281110. Epub 2013 Jul 29. PMID:23898172

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (128 Kb) [Save to disk]

Biological Unit Coordinates (4k1g.pdb1.gz) 63 Kb

Biological Unit Coordinates (4k1g.pdb2.gz) 62 Kb

LPC: Ligand-Protein Contacts for 4K1G

CSU: Contacts of Structural Units for 4K1G

Structure Factors (807 Kb)

Retrieve 4K1G in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4K1G from S2C, [Save to disk]

Re-refined 4k1g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4K1G in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4k1g] [4k1g_A] [4k1g_B] [4k1g_E] [4k1g_F] [4k1g_H] [4k1g_M] [4k1g_N] [4k1g_O]

SWISS-PROT database:

Domain found in 4K1G: [AP2Ec ] by SMART

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