4K33 Transferase date Apr 10, 2013
title Crystal Structure Of Fgf Receptor 3 (Fgfr3) Kinase Domain Ha The K650e Mutation, A Gain-Of-Function Mutation Responsible Thanatophoric Dysplasia Type II And Spermatocytic Seminoma
authors Z.Huang, H.Chen, M.Mohammadi
compound source
Molecule: Fibroblast Growth Factor Receptor 3
Chain: A
Fragment: Human Fgf Receptor 3 Kinase Domain
Synonym: Fgfr-3
Ec: 2.7.10.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fgfr3, Jtk4
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Plys-S
symmetry Space Group: P 21 21 21
R_factor 0.175 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.226 61.427 100.666 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.34 Å
ligand ACP, MG enzyme Transferase E.C.2.7.10.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural Mimicry of A-Loop Tyrosine Phosphorylation by a Pathogenic FGF Receptor 3 Mutation., Huang Z, Chen H, Blais S, Neubert TA, Li X, Mohammadi M, Structure. 2013 Aug 20. pii: S0969-2126(13)00267-0. doi:, 10.1016/j.str.2013.07.017. PMID:23972473
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk]
  • Biological Unit Coordinates (4k33.pdb1.gz) 105 Kb
  • LPC: Ligand-Protein Contacts for 4K33
  • CSU: Contacts of Structural Units for 4K33
  • Structure Factors (212 Kb)
  • Retrieve 4K33 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4K33 from S2C, [Save to disk]
  • Re-refined 4k33 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4K33 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4K33
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4K33, from MSDmotif at EBI
  • Fold representative 4k33 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4k33] [4k33_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4K33: [TyrKc ] by SMART
  • Other resources with information on 4K33
  • Community annotation for 4K33 at PDBWiki (http://pdbwiki.org)

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