4K3J date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceMonovalent antibody design and mechanism of action of onartuzumab, a MET antagonist with anti-tumor activity as a therapeutic agent., Merchant M, Ma X, Maun HR, Zheng Z, Peng J, Romero M, Huang A, Yang NY, Nishimura M, Greve J, Santell L, Zhang YW, Su Y, Kaufman DW, Billeci KL, Mai E, Moffat B, Lim A, Duenas ET, Phillips HS, Xiang H, Young JC, Vande Woude GF, Dennis MS, Reilly DE, Schwall RH, Starovasnik MA, Lazarus RA, Yansura DG, Proc Natl Acad Sci U S A. 2013 Aug 6;110(32):E2987-96. doi:, 10.1073/pnas.1302725110. Epub 2013 Jul 23. PMID:23882082
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (386 Kb) [Save to disk]
  • Biological Unit Coordinates (4k3j.pdb1.gz) 379 Kb
  • LPC: Ligand-Protein Contacts for 4K3J
  • CSU: Contacts of Structural Units for 4K3J
  • Structure Factors (499 Kb)
  • Retrieve 4K3J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4K3J from S2C, [Save to disk]
  • Re-refined 4k3j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4K3J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4k3j] [4k3j_A] [4k3j_B] [4k3j_H] [4k3j_L]
  • SWISS-PROT database:
  • Domains found in 4K3J: [IG_like] [IGv] [PSI] [Sema] [Tryp_SPc ] by SMART

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