4KG9 Crystal Structure Of USP7-NTD with MCM-BP date 2013-04-29
authors Saridakis, V., Luthra, N.
compound source
symmetry
R_factor
R_Free 0.233
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.70
Primary referenceA role for USP7 in DNA replication., Jagannathan M, Nguyen T, Gallo D, Luthra N, Brown GW, Saridakis V, Frappier L, Mol Cell Biol. 2014 Jan;34(1):132-45. doi: 10.1128/MCB.00639-13. Epub 2013 Nov 4. PMID:24190967
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (31 Kb) [Save to disk]
  • Biological Unit Coordinates (4kg9.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 4KG9
  • Structure Factors (193 Kb)
  • Retrieve 4KG9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4KG9 from S2C, [Save to disk]
  • Re-refined 4kg9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4KG9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4KG9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4KG9, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4kg9_B] [4kg9] [4kg9_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4KG9: [MATH ] by SMART
  • Other resources with information on 4KG9
  • Community annotation for 4KG9 at PDBWiki (http://pdbwiki.org)

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