4KK1	Crystal Structure of TSC1 core domain from S. pombe	date	2013-05-05
authors	Sun, W., Zhu, Y., Wang, Z.Z., Zhong, Q., Gao, F., Lou, J.Z., Gong, W.M., Xu, W.Q.
compound		source
symmetry		R_factor R_Free 0.26769
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	3.30
ligand	MSE	enzyme
Primary reference	Crystal structure of the yeast TSC1 core domain and implications for tuberous sclerosis pathological mutations., Sun W, Zhu YJ, Wang Z, Zhong Q, Gao F, Lou J, Gong W, Xu W, Nat Commun. 2013 Jul 16;4:2135. doi: 10.1038/ncomms3135. PMID:23857276

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1308 Kb) [Save to disk] Biological Unit Coordinates (4kk1.pdb1.gz) 142 Kb Biological Unit Coordinates (4kk1.pdb2.gz) 141 Kb Biological Unit Coordinates (4kk1.pdb3.gz) 141 Kb Biological Unit Coordinates (4kk1.pdb4.gz) 140 Kb Biological Unit Coordinates (4kk1.pdb5.gz) 140 Kb Biological Unit Coordinates (4kk1.pdb6.gz) 142 Kb Biological Unit Coordinates (4kk1.pdb7.gz) 141 Kb Biological Unit Coordinates (4kk1.pdb8.gz) 140 Kb Biological Unit Coordinates (4kk1.pdb9.gz) 140 Kb LPC: Ligand-Protein Contacts for 4KK1 CSU: Contacts of Structural Units for 4KK1 Structure Factors (2561 Kb) Retrieve 4KK1 in mmCIF format [Save to disk] Re-refined 4kk1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4KK1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4KK1

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4KK1, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4kk1_A] [4kk1_O] [4kk1_S] [4kk1_H] [4kk1_K] [4kk1_G] [4kk1_Q] [4kk1_N] [4kk1_C] [4kk1_L] [4kk1_P] [4kk1_D] [4kk1_I] [4kk1_M] [4kk1_T] [4kk1_E] [4kk1] [4kk1_R] [4kk1_F] [4kk1_B] [4kk1_J] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4KK1

Community annotation for 4KK1 at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---