4KO0 CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH an anilinylpyrimidine derivative (JLJ-135) date 2013-05-10
authors Das, K., Bauman, J.D., Arnold, E.
compound source
symmetry
R_factor
R_Free 0.275
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.95
ligand EDO, JLJ, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceExtension into the entrance channel of HIV-1 reverse transcriptase-Crystallography and enhanced solubility., Bollini M, Frey KM, Cisneros JA, Spasov KA, Das K, Bauman JD, Arnold E, Anderson KS, Jorgensen WL, Bioorg Med Chem Lett. 2013 Jul 8. pii: S0960-894X(13)00826-3. doi:, 10.1016/j.bmcl.2013.06.093. PMID:23899617
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (171 Kb) [Save to disk]
  • Biological Unit Coordinates (4ko0.pdb1.gz) 166 Kb
  • LPC: Ligand-Protein Contacts for 4KO0
  • CSU: Contacts of Structural Units for 4KO0
  • Structure Factors (1285 Kb)
  • Retrieve 4KO0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4KO0 from S2C, [Save to disk]
  • Re-refined 4ko0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4KO0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4KO0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4KO0, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ko0_B] [4ko0] [4ko0_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4KO0
  • Community annotation for 4KO0 at PDBWiki (http://pdbwiki.org)

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