4KSL date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
I, G, A, O, W, S, M, B, Q, E, K, U


Primary referenceThe linear ubiquitin-specific deubiquitinase gumby regulates angiogenesis., Rivkin E, Almeida SM, Ceccarelli DF, Juang YC, MacLean TA, Srikumar T, Huang H, Dunham WH, Fukumura R, Xie G, Gondo Y, Raught B, Gingras AC, Sicheri F, Cordes SP, Nature. 2013 Jun 20;498(7454):318-24. doi: 10.1038/nature12296. Epub 2013 May 24. PMID:23708998
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1719 Kb) [Save to disk]
  • Biological Unit Coordinates (4ksl.pdb1.gz) 148 Kb
  • Biological Unit Coordinates (4ksl.pdb2.gz) 148 Kb
  • Biological Unit Coordinates (4ksl.pdb3.gz) 148 Kb
  • Biological Unit Coordinates (4ksl.pdb4.gz) 147 Kb
  • Biological Unit Coordinates (4ksl.pdb5.gz) 148 Kb
  • Biological Unit Coordinates (4ksl.pdb6.gz) 150 Kb
  • Biological Unit Coordinates (4ksl.pdb7.gz) 149 Kb
  • Biological Unit Coordinates (4ksl.pdb8.gz) 150 Kb
  • Biological Unit Coordinates (4ksl.pdb9.gz) 148 Kb
  • CSU: Contacts of Structural Units for 4KSL
  • Structure Factors (2556 Kb)
  • Retrieve 4KSL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4KSL from S2C, [Save to disk]
  • Re-refined 4ksl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4KSL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ksl] [4ksl_A] [4ksl_B] [4ksl_C] [4ksl_D] [4ksl_E] [4ksl_F] [4ksl_G] [4ksl_H] [4ksl_I] [4ksl_J] [4ksl_K] [4ksl_L] [4ksl_M] [4ksl_N] [4ksl_O] [4ksl_P] [4ksl_Q] [4ksl_R] [4ksl_S] [4ksl_T] [4ksl_U] [4ksl_V] [4ksl_W] [4ksl_X]
  • SWISS-PROT database:
  • Domain found in 4KSL: [UBQ ] by SMART

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