4KZY Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A. date 2013-05-30
authors Lomakin, I.B., Steitz, T.A.
compound source
symmetry
R_factor
R_Free 0.3478
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 7.01
Gene
Ontology
ChainFunctionProcessComponent
A


B


C


D


E


F


G


H


I


J


L


M


N


O


P


Q


R


S


T


U


V


W


X


Y


Z


a


b


c


d


e


f


l


n


Primary referenceThe initiation of mammalian protein synthesis and mRNA scanning mechanism., Lomakin IB, Steitz TA, Nature. 2013 Jul 21. doi: 10.1038/nature12355. PMID:23873042
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (3381 Kb) [Save to disk]
  • Biological Unit Coordinates (4kzy.pdb1.gz) 3363 Kb
  • CSU: Contacts of Structural Units for 4KZY
  • Structure Factors (574 Kb)
  • Retrieve 4KZY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4KZY from S2C, [Save to disk]
  • Re-refined 4kzy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4KZY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4KZY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4KZY, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4kzy_f] [4kzy_U] [4kzy_e] [4kzy_Q] [4kzy_I] [4kzy] [4kzy_d] [4kzy_b] [4kzy_T] [4kzy_K] [4kzy_P] [4kzy_n] [4kzy_E] [4kzy_g] [4kzy_N] [4kzy_W] [4kzy_G] [4kzy_c] [4kzy_X] [4kzy_L] [4kzy_l] [4kzy_Z] [4kzy_C] [4kzy_i] [4kzy_A] [4kzy_H] [4kzy_S] [4kzy_J] [4kzy_B] [4kzy_V] [4kzy_F] [4kzy_a] [4kzy_Y] [4kzy_D] [4kzy_M] [4kzy_O] [4kzy_R]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4KZY: [KH] [Ribosomal_S10] [Ribosomal_S13_N] [Ribosomal_S15] [Ribosomal_S19e] [Ribosomal_S27] [Ribosomal_S3Ae] [Ribosomal_S4] [Ribosomal_S6e] [S4] [UBQ] [WD40] [eIF1a ] by SMART
  • Other resources with information on 4KZY
  • Community annotation for 4KZY at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science