4L59 Crystal structure of the 3-MBT repeat domain of L3MBTL3 and UNC2533 complex date
authors Zhong, N., Dong, A., Ravichandran, M., Camerino, M.A., Dickson, B.M., James, L.I., Baughman, B.M., Norris, J.L., Kireev, D.B., Janzen, W.P., Graslund, S., Frye, S.V., Bountra, C., Edwards, A.M., Arrowsmith, C.H., Brown, P.J., SGC, Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.2500
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.29
ligand 1VZ, SO4, UNX enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe structure-activity relationships of L3MBTL3 inhibitors: flexibility of the dimer interface., Camerino MA, Zhong N, Dong A, Dickson BM, James LI, Baughman BM, Norris JL, Kireev DB, Janzen WP, Arrowsmith CH, Frye SV, Medchemcomm. 2013 Nov;4(11):1501-1507. doi: 10.1039/C3MD00197K. PMID:24466405
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (4l59.pdb1.gz) 102 Kb
  • LPC: Ligand-Protein Contacts for 4L59
  • CSU: Contacts of Structural Units for 4L59
  • Structure Factors (1320 Kb)
  • Retrieve 4L59 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4L59 from S2C, [Save to disk]
  • Re-refined 4l59 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4L59 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4L59
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4L59, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4l59_A] [4l59]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4L59: [MBT ] by SMART
  • Other resources with information on 4L59
  • Community annotation for 4L59 at PDBWiki (http://pdbwiki.org)

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