4L9D date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, CL, NA, PEG enzyme
Gene VCM66
Primary referenceCalcium binding by the PKD1 domain regulates interdomain flexibility in Vibrio cholerae metalloprotease PrtV., Edwin A, Rompikuntal P, Bjorn E, Stier G, Wai SN, Sauer-Eriksson AE, FEBS Open Bio. 2013 Jun 27;3:263-70. doi: 10.1016/j.fob.2013.06.003. Print 2013. PMID:23905008
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (74 Kb) [Save to disk]
  • Biological Unit Coordinates (4l9d.pdb1.gz) 36 Kb
  • Biological Unit Coordinates (4l9d.pdb2.gz) 35 Kb
  • LPC: Ligand-Protein Contacts for 4L9D
  • CSU: Contacts of Structural Units for 4L9D
  • Structure Factors (778 Kb)
  • Retrieve 4L9D in mmCIF format [Save to disk]
  • Re-refined 4l9d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4L9D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4l9d] [4l9d_A] [4l9d_B]
  • SWISS-PROT database:
  • Domain found in 4L9D: [PKD ] by SMART

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