4LCW The structure of human MAIT TCR in complex with MR1-K43A-RL-6-Me-7OH date 2013-06-24
authors Patel, O., Rossjohn, J.
compound source
symmetry
R_factor
R_Free 0.2267
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.40
ligand 1VY, GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, B
  • cellular response to iron io...

    • Primary referenceAntigen-loaded MR1 tetramers define T cell receptor heterogeneity in mucosal-associated invariant T cells., Reantragoon R, Corbett AJ, Sakala IG, Gherardin NA, Furness JB, Chen Z, Eckle SB, Uldrich AP, Birkinshaw RW, Patel O, Kostenko L, Meehan B, Kedzierska K, Liu L, Fairlie DP, Hansen TH, Godfrey DI, Rossjohn J, McCluskey J, Kjer-Nielsen L, J Exp Med. 2013 Oct 21;210(11):2305-20. doi: 10.1084/jem.20130958. Epub 2013 Oct , 7. PMID:24101382
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (262 Kb) [Save to disk]
  • Biological Unit Coordinates (4lcw.pdb1.gz) 130 Kb
  • Biological Unit Coordinates (4lcw.pdb2.gz) 132 Kb
  • LPC: Ligand-Protein Contacts for 4LCW
  • CSU: Contacts of Structural Units for 4LCW
  • Structure Factors (3421 Kb)
  • Retrieve 4LCW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4LCW from S2C, [Save to disk]
  • Re-refined 4lcw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4LCW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4LCW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4LCW, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4lcw_B] [4lcw_H] [4lcw_D] [4lcw_C] [4lcw_A] [4lcw_E] [4lcw_G] [4lcw] [4lcw_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4LCW: [IG_like] [IGc1] [IGv ] by SMART
    • Other resources with information on 4LCW
  • Community annotation for 4LCW at PDBWiki (http://pdbwiki.org)

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