4LD7 Crystal structure of AnaPT from Neosartorya fischeri date
authors Zocher, G., Stehle, T.
compound source
symmetry
R_factor
R_Free 0.20211
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.83
ligand NA, PIS enzyme
Gene NFIA
Gene
Ontology
ChainFunctionProcessComponent
F, N, K, E, M, C, L, A, J, O, P, B, H, D, I, G


Primary referenceCatalytic Mechanism of Stereospecific Formation of cis-Configured Prenylated Pyrroloindoline Diketopiperazines by Indole Prenyltransferases., Yu X, Zocher G, Xie X, Liebhold M, Schutz S, Stehle T, Li SM, Chem Biol. 2013 Nov 12. pii: S1074-5521(13)00364-5. doi:, 10.1016/j.chembiol.2013.10.007. PMID:24239009
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2024 Kb) [Save to disk]
  • Biological Unit Coordinates (4ld7.pdb1.gz) 506 Kb
  • Biological Unit Coordinates (4ld7.pdb2.gz) 511 Kb
  • Biological Unit Coordinates (4ld7.pdb3.gz) 515 Kb
  • Biological Unit Coordinates (4ld7.pdb4.gz) 513 Kb
  • LPC: Ligand-Protein Contacts for 4LD7
  • CSU: Contacts of Structural Units for 4LD7
  • Structure Factors (1299 Kb)
  • Retrieve 4LD7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4LD7 from S2C, [Save to disk]
  • Re-refined 4ld7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4LD7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4LD7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4LD7, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ld7_K] [4ld7_J] [4ld7_C] [4ld7_G] [4ld7] [4ld7_M] [4ld7_I] [4ld7_E] [4ld7_F] [4ld7_D] [4ld7_B] [4ld7_O] [4ld7_H] [4ld7_P] [4ld7_L] [4ld7_N] [4ld7_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4LD7
  • Community annotation for 4LD7 at PDBWiki (http://pdbwiki.org)

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