4LDQ Crystal Structure of the Mediator of Rho Dependent Invasion date 2013-06-24
authors Sousa, M.C., Templeton, P.D., Metzner, S.I.
compound source
symmetry
R_factor
R_Free 0.2114
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of MRDI Explains its Dual Function as a Metabolic Enzyme and a Mediator of Cell Invasion., Templeton PD, Litman ES, Metzner SI, Ahn NG, Sousa MC, Biochemistry. 2013 Jul 16. PMID:23859498
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (211 Kb) [Save to disk]
  • Biological Unit Coordinates (4ldq.pdb1.gz) 206 Kb
  • CSU: Contacts of Structural Units for 4LDQ
  • Structure Factors (343 Kb)
  • Retrieve 4LDQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4LDQ from S2C, [Save to disk]
  • Re-refined 4ldq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4LDQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4LDQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4LDQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ldq] [4ldq_A] [4ldq_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4LDQ
  • Community annotation for 4LDQ at PDBWiki (http://pdbwiki.org)

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