4LG0 Transcription Dna date Jun 27, 2013
title Structure Of A Ternary Foxo1-Ets1 Dna Complex
authors G.Birrane, W.C.Choy, D.Datta, C.A.Geiger, M.A.Grant
compound source
Molecule: Forkhead Box Protein O1
Chain: A
Fragment: Dna Binding Domain, Unp Residues 143-270
Synonym: Forkhead Box Protein O1a, Forkhead In Rhabdomyosar
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fkhr, Foxo1, Foxo1a
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-50b

Molecule: Protein C-Ets-1
Chain: B
Fragment: Dna Binding Domain, Unp Residues 331-440
Synonym: P54
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: C-Ets-1, Ets1, Ewsr2
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-19

Molecule: Dna (5'- D(Dtpdtpdcpdapdcpdgpdgpdtpdtpdtpdcpdcpdtpdgp Pdtpdtpdgpdt)-3');
Chain: C
Fragment: Fox-Ets Site From Ve-Cadherin
Engineered: Yes

Synthetic: Yes
Other_details: This Sequence Occurs Naturally In Humans.

Molecule: Dna (5'- D(Dapdapdapdcpdapdapdtpdapdapdcpdapdgpdgpdap Pdcpdgpdtpdg)-3');
Chain: D
Fragment: Fox-Ets Site From Ve-Cadherin
Engineered: Yes

Synthetic: Yes
Other_details: This Sequence Occurs Naturally In Humans.
symmetry Space Group: C 2 2 21
R_factor 0.194 R_Free 0.243
crystal
cell
length a length b length c angle alpha angle beta angle gamma
68.658 114.944 136.325 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.19 Å
ligand CA, PG4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (115 Kb) [Save to disk]
  • Biological Unit Coordinates (4lg0.pdb1.gz) 109 Kb
  • LPC: Ligand-Protein Contacts for 4LG0
  • CSU: Contacts of Structural Units for 4LG0
  • Structure Factors (390 Kb)
  • Retrieve 4LG0 in mmCIF format [Save to disk]
  • Re-refined 4lg0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4LG0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4LG0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4LG0, from MSDmotif at EBI
  • Fold representative 4lg0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4lg0] [4lg0_C] [4lg0_A] [4lg0_D] [4lg0_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4LG0: [ETS] [FH ] by SMART
  • Other resources with information on 4LG0
  • Community annotation for 4LG0 at PDBWiki (http://pdbwiki.org)

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