4LHU Crystal Structure of 9C2 TCR bound to CD1d date 2013-07-01
authors Uldrich, A.P., Nours, J.Le., Pellicci, D.G., Gras, S., Rossjohn, J., Godfrey, D.I.
compound source
symmetry
R_factor
R_Free 0.2431
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.87
ligand BMA, CL, JLS, MG, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
B
  • cellular response to iron io...

    • Primary referenceCD1d-lipid antigen recognition by the gammadelta TCR., Uldrich AP, Le Nours J, Pellicci DG, Gherardin NA, McPherson KG, Lim RT, Patel O, Beddoe T, Gras S, Rossjohn J, Godfrey DI, Nat Immunol. 2013 Sep 29. doi: 10.1038/ni.2713. PMID:24076636
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (292 Kb) [Save to disk]
  • Biological Unit Coordinates (4lhu.pdb1.gz) 284 Kb
  • LPC: Ligand-Protein Contacts for 4LHU
  • CSU: Contacts of Structural Units for 4LHU
  • Structure Factors (1644 Kb)
  • Retrieve 4LHU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4LHU from S2C, [Save to disk]
  • Re-refined 4lhu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4LHU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4LHU
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4LHU, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4lhu_D] [4lhu] [4lhu_A] [4lhu_B] [4lhu_G]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4LHU: [IG_like] [IGc1] [IGv ] by SMART
    • Other resources with information on 4LHU
  • Community annotation for 4LHU at PDBWiki (http://pdbwiki.org)

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