4LIK Crystal structure of the catalytic subunit of human primase date 2013-07-02
authors Vaithiyalingam, S., Eichman, B.F., Chazin, W.J.
compound source
symmetry
R_factor
R_Free 0.1980
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.70
ligand CIT, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceInsights into Eukaryotic Primer Synthesis from Structures of the p48 Subunit of Human DNA Primase., Vaithiyalingam S, Arnett DR, Aggarwal A, Eichman BF, Fanning E, Chazin WJ, J Mol Biol. 2013 Nov 13. pii: S0022-2836(13)00718-3. doi:, 10.1016/j.jmb.2013.11.007. PMID:24239947
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (142 Kb) [Save to disk]
  • Biological Unit Coordinates (4lik.pdb1.gz) 135 Kb
  • LPC: Ligand-Protein Contacts for 4LIK
  • CSU: Contacts of Structural Units for 4LIK
  • Structure Factors (712 Kb)
  • Retrieve 4LIK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4LIK from S2C, [Save to disk]
  • Re-refined 4lik structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4LIK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4LIK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4LIK, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4lik_A] [4lik]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4LIK
  • Community annotation for 4LIK at PDBWiki (http://pdbwiki.org)

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