4LL7 Transport Protein date Jul 09, 2013
title Structure Of She3p Amino Terminus.
authors H.Shi, N.Singh, F.Esselborn, G.Blobel
compound source
Molecule: Swi5-Dependent Ho Expression Protein 3
Chain: A, B, C, D, E, F, G, H
Fragment: Unp Residues 42-137
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c
Gene: She3, Ybr130c, Ybr1005
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor 0.231 R_Free 0.264
crystal
cell
length a length b length c angle alpha angle beta angle gamma
28.069 49.576 149.950 89.96 84.67 89.98
method X-Ray Diffractionresolution 2.31 Å
ligand DTT, DY, EDO, IPA, PT, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Primary referenceStructure of a myosin*adaptor complex and pairing by cargo., Shi H, Singh N, Esselborn F, Blobel G, Proc Natl Acad Sci U S A. 2014 Mar 25;111(12):E1082-90. doi:, 10.1073/pnas.1401428111. Epub 2014 Feb 12. PMID:24522109
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (143 Kb) [Save to disk]
  • Biological Unit Coordinates (4ll7.pdb1.gz) 37 Kb
  • Biological Unit Coordinates (4ll7.pdb2.gz) 36 Kb
  • Biological Unit Coordinates (4ll7.pdb3.gz) 36 Kb
  • Biological Unit Coordinates (4ll7.pdb4.gz) 35 Kb
  • LPC: Ligand-Protein Contacts for 4LL7
  • CSU: Contacts of Structural Units for 4LL7
  • Structure Factors (242 Kb)
  • Retrieve 4LL7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4LL7 from S2C, [Save to disk]
  • Re-refined 4ll7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4LL7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4LL7
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4LL7, from MSDmotif at EBI
  • Fold representative 4ll7 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ll7_G] [4ll7_C] [4ll7] [4ll7_F] [4ll7_D] [4ll7_A] [4ll7_B] [4ll7_E] [4ll7_H]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4LL7
  • Community annotation for 4LL7 at PDBWiki (http://pdbwiki.org)

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