4LXG Crystal structure of DxnB2, a carbon - carbon bond hydrolase from Sphingomonas wittichii RW1 date
authors Bhowmik, S., Bolin, J.T.
compound source
symmetry
R_factor
R_Free 0.2336
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.22
ligand SO4 enzyme
Gene SWIT
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe Lid Domain of the MCP Hydrolase DxnB2 Contributes to the Reactivity toward Recalcitrant PCB Metabolites., Ruzzini AC, Bhowmik S, Yam KC, Ghosh S, Bolin JT, Eltis LD, Biochemistry. 2013 Aug 20;52(33):5685-95. doi: 10.1021/bi400774m. Epub 2013 Aug, 9. PMID:23879719
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk]
  • Biological Unit Coordinates (4lxg.pdb1.gz) 179 Kb
  • LPC: Ligand-Protein Contacts for 4LXG
  • CSU: Contacts of Structural Units for 4LXG
  • Structure Factors (326 Kb)
  • Retrieve 4LXG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4LXG from S2C, [Save to disk]
  • Re-refined 4lxg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4LXG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4LXG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4LXG, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4lxg] [4lxg_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4LXG
  • Community annotation for 4LXG at PDBWiki (http://pdbwiki.org)

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