4M6W Dna Binding Protein date Aug 11, 2013
title Crystal Structure Of The C-Terminal Segment Of Fancm In Comp Faap24
authors H.Yang, T.Zhang, L.Tong, J.Ding
compound source
Molecule: Fanconi Anemia Group M Protein
Chain: A
Fragment: Unp Residues 1813-2031
Synonym: Protein Facm, Atp-Dependent Rna Helicase Fancm, Fa Anemia-Associated Polypeptide Of 250 Kda, Faap250, Protein Ortholog;
Ec: 3.6.4.13
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fancm, Kiaa1596
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3) Codon Plus
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Petduet

Molecule: Fanconi Anemia-Associated Protein Of 24 Kda
Chain: B
Fragment: Unp Residues 17-215
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Faap24, C19orf40
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3) Codon Plus
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: I 2 2 2
R_factor 0.254 R_Free 0.299
crystal
cell
length a length b length c angle alpha angle beta angle gamma
79.174 98.111 140.156 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.90 Å
ligand SO4 enzyme Hydrolase E.C.3.6.4.13 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceStructural insights into the functions of the FANCM-FAAP24 complex in DNA repair., Yang H, Zhang T, Tao Y, Wang F, Tong L, Ding J, Nucleic Acids Res. 2013 Sep 3. PMID:24003026
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (4m6w.pdb1.gz) 63 Kb
  • LPC: Ligand-Protein Contacts for 4M6W
  • CSU: Contacts of Structural Units for 4M6W
  • Structure Factors (208 Kb)
  • Retrieve 4M6W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4M6W from S2C, [Save to disk]
  • Re-refined 4m6w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4M6W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4M6W
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4M6W, from MSDmotif at EBI
  • Fold representative 4m6w from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4m6w] [4m6w_A] [4m6w_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4M6W: [ERCC4 ] by SMART
  • Other resources with information on 4M6W
  • Community annotation for 4M6W at PDBWiki (http://pdbwiki.org)

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