4M7B Human tankyrase 2 - catalytic Parp domain in complex with an inhibitor UPF1854 date
authors Karlberg, T., Camaioni, E., Schuler, H.
compound source
symmetry
R_factor
R_Free 0.22575
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.95
ligand 28C, SO4, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C


Primary referenceDesign, Synthesis, Crystallographic Studies, and Preliminary Biological Appraisal of New Substituted Triazolo[4,3-b]pyridazin-8-amine Derivatives as Tankyrase Inhibitors., Liscio P, Carotti A, Asciutti S, Karlberg T, Bellocchi D, Llacuna L, Macchiarulo A, Aaronson SA, Schuler H, Pellicciari R, Camaioni E, J Med Chem. 2014 Feb 24. PMID:24527792
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (4m7b.pdb1.gz) 38 Kb
  • Biological Unit Coordinates (4m7b.pdb2.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 4M7B
  • CSU: Contacts of Structural Units for 4M7B
  • Structure Factors (334 Kb)
  • Retrieve 4M7B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4M7B from S2C, [Save to disk]
  • Re-refined 4m7b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4M7B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4M7B
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4M7B, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4m7b_C] [4m7b_A] [4m7b]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4M7B
  • Community annotation for 4M7B at PDBWiki (http://pdbwiki.org)

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