OCA Atlas for 4MCM

4MCM

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

SO4, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
I, E, G, L, H, D, B, A, C, J, K, F	superoxide dismutase activit... protein binding	anterograde axonal transport... retrograde axonal transport

Primary reference

Insights into the Role of the Unusual Disulfide Bond in Copper-Zinc Superoxide Dismutase., Sea K, Sohn SH, Durazo A, Sheng Y, Shaw BF, Cao X, Taylor AB, Whitson LJ, Holloway SP, Hart PJ, Cabelli DE, Gralla EB, Valentine JS, J Biol Chem. 2014 Nov 28. pii: jbc.M114.588798. PMID:25433341

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (295 Kb) [Save to disk]

Biological Unit Coordinates (4mcm.pdb1.gz) 55 Kb

Biological Unit Coordinates (4mcm.pdb2.gz) 51 Kb

Biological Unit Coordinates (4mcm.pdb3.gz) 51 Kb

Biological Unit Coordinates (4mcm.pdb4.gz) 55 Kb

Biological Unit Coordinates (4mcm.pdb5.gz) 51 Kb

Biological Unit Coordinates (4mcm.pdb6.gz) 51 Kb

LPC: Ligand-Protein Contacts for 4MCM

CSU: Contacts of Structural Units for 4MCM

Structure Factors (1149 Kb)

Retrieve 4MCM in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4MCM from S2C, [Save to disk]

Re-refined 4mcm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4MCM in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4mcm] [4mcm_A] [4mcm_B] [4mcm_C] [4mcm_D] [4mcm_E] [4mcm_F] [4mcm_G] [4mcm_H] [4mcm_I] [4mcm_J] [4mcm_K] [4mcm_L]

SWISS-PROT database:

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