4MDR Crystal structure of adaptor protein complex 4 (AP-4) mu4 subunit C-terminal domain D190A mutant, in complex with a sorting peptide from the amyloid precursor protein (APP) date
authors Ross, B.H., Lin, Y., Corales, E.A., Burgos, P.V., Mardones, G.A.
compound source
symmetry
R_factor
R_Free 0.2596
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.85
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and Functional Characterization of Cargo-Binding Sites on the mu4-Subunit of Adaptor Protein Complex 4., Ross BH, Lin Y, Corales EA, Burgos PV, Mardones GA, PLoS One. 2014 Feb 3;9(2):e88147. doi: 10.1371/journal.pone.0088147. eCollection , 2014. PMID:24498434
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (4mdr.pdb1.gz) 43 Kb
  • CSU: Contacts of Structural Units for 4MDR
  • Structure Factors (315 Kb)
  • Retrieve 4MDR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4MDR from S2C, [Save to disk]
  • Re-refined 4mdr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4MDR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4MDR
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4MDR, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4mdr] [4mdr_A] [4mdr_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4MDR
  • Community annotation for 4MDR at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science