4MHF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BDP, GCU enzyme
Gene BPRO
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceExperimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes., Vetting MW, Al-Obaidi N, Zhao S, San Francisco B, Kim J, Wichelecki DJ, Bouvier JT, Solbiati JO, Vu H, Zhang X, Rodionov DA, Love JD, Hillerich BS, Seidel RD, Quinn RJ, Osterman AL, Cronan JE, Jacobson MP, Gerlt JA, Almo SC, Biochemistry. 2015 Jan 27;54(3):909-31. doi: 10.1021/bi501388y. Epub 2015 Jan 16. PMID:25540822
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (151 Kb) [Save to disk]
  • Biological Unit Coordinates (4mhf.pdb1.gz) 145 Kb
  • LPC: Ligand-Protein Contacts for 4MHF
  • CSU: Contacts of Structural Units for 4MHF
  • Structure Factors (1943 Kb)
  • Retrieve 4MHF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4MHF from S2C, [Save to disk]
  • Re-refined 4mhf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4MHF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4MHF
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4MHF, from MSDmotif at EBI
  • Fold representative 4mhf from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4mhf] [4mhf_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4MHF
  • Community annotation for 4MHF at PDBWiki (http://pdbwiki.org)

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