OCA Atlas for 4MJI

4MJI

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
B, G		cellular response to iron io...

Primary reference

Molecular basis of a dominant T cell response to an HIV reverse transcriptase 8-mer epitope presented by the protective allele HLA-B*51:01., Motozono C, Kuse N, Sun X, Rizkallah PJ, Fuller A, Oka S, Cole DK, Sewell AK, Takiguchi M, J Immunol. 2014 Apr 1;192(7):3428-34. doi: 10.4049/jimmunol.1302667. Epub 2014, Mar 5. PMID:24600035

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (552 Kb) [Save to disk]

Biological Unit Coordinates (4mji.pdb1.gz) 274 Kb

Biological Unit Coordinates (4mji.pdb2.gz) 274 Kb

CSU: Contacts of Structural Units for 4MJI

Structure Factors (1655 Kb)

Retrieve 4MJI in mmCIF format [Save to disk]

Re-refined 4mji structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4MJI in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4mji] [4mji_A] [4mji_B] [4mji_C] [4mji_D] [4mji_E] [4mji_F] [4mji_G] [4mji_H] [4mji_I] [4mji_J]

SWISS-PROT database:

Domains found in 4MJI: [IG_like] [IGc1] [IGv ] by SMART

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