4MPI Crystal structure of the chitin-binding module (CBM18) of a chitinase-like protein from Hevea brasiliensis date
authors Martinez-Caballero, C.S., Hermoso, J.A., Rodriguez-Romero, A.
compound source
symmetry
R_factor
R_Free 0.2160
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.60
ligand DIO, MES enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceComparative study of two GH19 chitinase-like proteins from Hevea brasiliensis, one exhibiting a novel carbohydrate-binding domain., Martinez-Caballero S, Cano-Sanchez P, Mares-Mejia I, Diaz-Sanchez AG, Macias-Rubalcava ML, Hermoso JA, Rodriguez-Romero A, FEBS J. 2014 Aug 8. doi: 10.1111/febs.12962. PMID:25104038
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (19 Kb) [Save to disk]
  • Biological Unit Coordinates (4mpi.pdb1.gz) 8 Kb
  • Biological Unit Coordinates (4mpi.pdb2.gz) 8 Kb
  • LPC: Ligand-Protein Contacts for 4MPI
  • CSU: Contacts of Structural Units for 4MPI
  • Structure Factors (595 Kb)
  • Retrieve 4MPI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4MPI from S2C, [Save to disk]
  • Re-refined 4mpi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4MPI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4MPI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4MPI, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4mpi] [4mpi_A] [4mpi_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4MPI: [ChtBD1 ] by SMART
  • Other resources with information on 4MPI
  • Community annotation for 4MPI at PDBWiki (http://pdbwiki.org)

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