4MQU Human GKRP complexed to AMG-3969 and S6P date
authors Jean, D.J.St., Ashton, K.S., Bartberger, M.D., Chen, J., Chmait, S., Cupples, R., Galbreath, E., Helmering, J., Jordan, S.R., Liu, L.
compound source
symmetry
R_factor
R_Free 0.27676
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.22
ligand GOL, IOD, MG9, S6P, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceSmall molecule disruptors of the glucokinase-glucokinase regulatory protein interaction: 2. Leveraging structure-based drug design to identify analogues with improved pharmacokinetic profiles., St Jean DJ Jr, Ashton KS, Bartberger MD, Chen J, Chmait S, Cupples R, Galbreath E, Helmering J, Hong FT, Jordan SR, Liu L, Kunz RK, Michelsen K, Nishimura N, Pennington LD, Poon SF, Reid D, Sivits G, Stec MM, Tadesse S, Tamayo N, Van G, Yang KC, Zhang J, Norman MH, Fotsch C, Lloyd DJ, Hale C, J Med Chem. 2014 Jan 23;57(2):325-38. doi: 10.1021/jm4016747. Epub 2014 Jan 9. PMID:24405213
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (195 Kb) [Save to disk]
  • Biological Unit Coordinates (4mqu.pdb1.gz) 95 Kb
  • Biological Unit Coordinates (4mqu.pdb2.gz) 97 Kb
  • LPC: Ligand-Protein Contacts for 4MQU
  • CSU: Contacts of Structural Units for 4MQU
  • Structure Factors (1446 Kb)
  • Retrieve 4MQU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4MQU from S2C, [Save to disk]
  • Re-refined 4mqu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4MQU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4MQU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4MQU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4mqu_B] [4mqu] [4mqu_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4MQU
  • Community annotation for 4MQU at PDBWiki (http://pdbwiki.org)

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