4MT1 Crystal Structure of the Neisseria gonorrhoeae MtrD Inner Membrane Multidrug Efflux Pump date
authors Su, C.C., Bolla, J.R., Yu, E.W.
compound source
symmetry
R_factor
R_Free 0.3331
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.54
Gene NGJG
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of the open state of the Neisseria gonorrhoeae MtrE outer membrane channel., Lei HT, Chou TH, Su CC, Bolla JR, Kumar N, Radhakrishnan A, Long F, Delmar JA, Do SV, Rajashankar KR, Shafer WM, Yu EW, PLoS One. 2014 Jun 5;9(6):e97475. doi: 10.1371/journal.pone.0097475. eCollection , 2014. PMID:24901251
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (160 Kb) [Save to disk]
  • Biological Unit Coordinates (4mt1.pdb1.gz) 460 Kb
  • CSU: Contacts of Structural Units for 4MT1
  • Structure Factors (260 Kb)
  • Retrieve 4MT1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4MT1 from S2C, [Save to disk]
  • Re-refined 4mt1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4MT1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4MT1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4MT1, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4mt1] [4mt1_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4MT1
  • Community annotation for 4MT1 at PDBWiki (http://pdbwiki.org)

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