4MYE Cymosema roseum seed lectin structure complexed with X-man date
authors Barroso-Neto, I.L., Rocha, B.A.M., Teixeira, C.S., Santiago, M.Q., Souza, L.A.G., Pires, A.F., Assreuy, A.M.S., Delatorre, P., Cavada, B.S.
compound source
symmetry
R_factor
R_Free 0.20854
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.65
ligand CA, MN, NA, XMM enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (4mye.pdb1.gz) 163 Kb
  • LPC: Ligand-Protein Contacts for 4MYE
  • CSU: Contacts of Structural Units for 4MYE
  • Structure Factors (645 Kb)
  • Retrieve 4MYE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4MYE from S2C, [Save to disk]
  • Re-refined 4mye structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4MYE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4MYE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4MYE, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4mye] [4mye_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4MYE
  • Community annotation for 4MYE at PDBWiki (http://pdbwiki.org)

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