4MZS Mouse cathepsin s with covalent ligand (3S,4S)-1-[(2-CHLOROPHENYL)SULFONYL]-N-[(2E)-2-IMINOETHYL]-4-(MORPHOLIN-4-YLCARBONYL)PYRROLIDINE-3-CARBOXAMIDE date
authors Kuglstatter, A., Stihle, M.
compound source
symmetry
R_factor
R_Free 0.2697
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.85
ligand 2EV enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceIdentification of Potent and Selective Cathepsin S Inhibitors Containing Different Central Cyclic Scaffolds., Hilpert H, Mauser H, Humm R, Anselm L, Kuehne H, Hartmann G, Gruener S, Banner DW, Benz J, Gsell B, Kuglstatter A, Stihle M, Thoma R, Sanchez RA, Iding H, Wirz B, Haap W, J Med Chem. 2013 Nov 22. PMID:24224654
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk]
  • Biological Unit Coordinates (4mzs.pdb1.gz) 39 Kb
  • Biological Unit Coordinates (4mzs.pdb2.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 4MZS
  • CSU: Contacts of Structural Units for 4MZS
  • Structure Factors (636 Kb)
  • Retrieve 4MZS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4MZS from S2C, [Save to disk]
  • Re-refined 4mzs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4MZS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4MZS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4MZS, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4mzs_A] [4mzs] [4mzs_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4MZS: [Pept_C1 ] by SMART
    • Other resources with information on 4MZS
  • Community annotation for 4MZS at PDBWiki (http://pdbwiki.org)

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