4N2C Crystal structure of Protein Arginine Deiminase 2 (F221/222A, 10 mM Ca2+) date
authors Slade, D.J., Zhang, X., Fang, P., Dreyton, C.J., Zhang, Y., Gross, M.L., Guo, M., Coonrod, S.A., Thompson, P.R.
compound source
symmetry
R_factor
R_Free 0.2728
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.02
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceProtein Arginine Deiminase 2 Binds Calcium in an Ordered Fashion: Implications for Inhibitor Design., Slade DJ, Fang P, Dreyton CJ, Zhang Y, Fuhrmann J, Rempel D, Bax BD, Coonrod SA, Lewis HD, Guo M, Gross ML, Thompson PR, ACS Chem Biol. 2015 Jan 26. PMID:25621824
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (211 Kb) [Save to disk]
  • Biological Unit Coordinates (4n2c.pdb1.gz) 407 Kb
  • LPC: Ligand-Protein Contacts for 4N2C
  • CSU: Contacts of Structural Units for 4N2C
  • Structure Factors (118 Kb)
  • Retrieve 4N2C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4N2C from S2C, [Save to disk]
  • Re-refined 4n2c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4N2C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4N2C
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4N2C, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4n2c_A] [4n2c]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4N2C
  • Community annotation for 4N2C at PDBWiki (http://pdbwiki.org)

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