4N5S Ternary complex structure of Klenow fragment of Taq DNA polymerase I707L mutant (Cs3C KlenTaq) with DNA and ddCTP date
authors Wu, E.Y.
compound source
symmetry
R_factor
R_Free 0.19156
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.67
ligand ACT, DCT, DOC, EPE, GOL, MG, MN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA Conservative Isoleucine to Leucine Mutation Causes Major Rearrangements and Cold Sensitivity in KlenTaq1 DNA Polymerase., Wu EY, Walsh AR, Materne EC, Hiltner EP, Zielinski B, Miller BR 3rd, Mawby L, Modeste E, Parish CA, Barnes WM, Kermekchiev MB, Biochemistry. 2015 Jan 9. PMID:25537790
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (113 Kb) [Save to disk]
  • Biological Unit Coordinates (4n5s.pdb1.gz) 107 Kb
  • LPC: Ligand-Protein Contacts for 4N5S
  • CSU: Contacts of Structural Units for 4N5S
  • Structure Factors (1294 Kb)
  • Retrieve 4N5S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4N5S from S2C, [Save to disk]
  • Re-refined 4n5s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4N5S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4N5S
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4N5S, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4n5s_C] [4n5s_B] [4n5s_A] [4n5s]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4N5S: [POLAc ] by SMART
  • Other resources with information on 4N5S
  • Community annotation for 4N5S at PDBWiki (http://pdbwiki.org)

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