4N6V Hydrolase Inhibitor date Oct 14, 2013
title Partial Rotational Order Disorder Structure Of Human Stefin
authors M.Renko, A.Taler-Vercic, M.Mihelic, E.Zerovnik, D.Turk
compound source
Molecule: Cystatin-B
Chain: 2, 1, 9, 8, 7, 6, 4, 3, 0, 5
Fragment: Unp Residues 8-98
Synonym: Stefin-B, Cpi-B, Liver Thiol Proteinase Inhibitor
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cstb
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 4
R_factor 0.190 R_Free 0.234
crystal
cell
length a length b length c angle alpha angle beta angle gamma
95.559 95.559 254.977 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
6, 3, 7, 9, 2, 8, 1, 4, 0, 5
  • endopeptidase inhibitor acti...
  • cysteine-type endopeptidase ...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (392 Kb) [Save to disk]
  • Biological Unit Coordinates (4n6v.pdb1.gz) 36 Kb
  • Biological Unit Coordinates (4n6v.pdb2.gz) 36 Kb
  • Biological Unit Coordinates (4n6v.pdb3.gz) 36 Kb
  • Biological Unit Coordinates (4n6v.pdb4.gz) 36 Kb
  • Biological Unit Coordinates (4n6v.pdb5.gz) 34 Kb
  • Biological Unit Coordinates (4n6v.pdb6.gz) 34 Kb
  • Biological Unit Coordinates (4n6v.pdb7.gz) 34 Kb
  • Biological Unit Coordinates (4n6v.pdb8.gz) 34 Kb
  • Biological Unit Coordinates (4n6v.pdb9.gz) 61 Kb
  • LPC: Ligand-Protein Contacts for 4N6V
  • CSU: Contacts of Structural Units for 4N6V
  • Structure Factors (1597 Kb)
  • Retrieve 4N6V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4N6V from S2C, [Save to disk]
  • Re-refined 4n6v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4N6V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4N6V
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4N6V, from MSDmotif at EBI
  • Fold representative 4n6v from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4n6v_6] [4n6v_8] [4n6v_2] [4n6v_7] [4n6v_1] [4n6v_9] [4n6v_3] [4n6v_4] [4n6v_0] [4n6v] [4n6v_5]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4N6V: [CY ] by SMART
  • Other resources with information on 4N6V
  • Community annotation for 4N6V at PDBWiki (http://pdbwiki.org)

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