4N9J Crystal structure of the cryptic polo box domain of human Plk4 date
authors Ku, B., Kim, J.H., Lee, K.S., Kim, S.J.
compound source
symmetry
R_factor
R_Free 0.2488
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.60
ligand CL, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceMolecular basis for unidirectional scaffold switching of human Plk4 in centriole biogenesis., Park SY, Park JE, Kim TS, Kim JH, Kwak MJ, Ku B, Tian L, Murugan RN, Ahn M, Komiya S, Hojo H, Kim NH, Kim BY, Bang JK, Erikson RL, Lee KW, Kim SJ, Oh BH, Yang W, Lee KS, Nat Struct Mol Biol. 2014 Jun 29. doi: 10.1038/nsmb.2846. PMID:24997597
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (159 Kb) [Save to disk]
  • Biological Unit Coordinates (4n9j.pdb1.gz) 154 Kb
  • LPC: Ligand-Protein Contacts for 4N9J
  • CSU: Contacts of Structural Units for 4N9J
  • Structure Factors (254 Kb)
  • Retrieve 4N9J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4N9J from S2C, [Save to disk]
  • Re-refined 4n9j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4N9J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4N9J
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4N9J, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4n9j] [4n9j_A] [4n9j_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4N9J
  • Community annotation for 4N9J at PDBWiki (http://pdbwiki.org)

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