4NAC Transcription date Oct 22, 2013
title Crystal Structure Of The N-Terminal Domain Of P15rs
authors K.Mei, Z.Jin, F.Ren, Y.Wang
compound source
Molecule: Regulation Of Nuclear Pre-Mrna Domain-Containing 1a;
Chain: A, B
Fragment: Unp Residues 1-131
Synonym: Cyclin-Dependent Kinase Inhibitor 2b-Related Prote P15ink4b-Related Protein;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: P15rs, Rprd1a
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b
symmetry Space Group: P 1 21 1
R_factor 0.174 R_Free 0.214
length a length b length c angle alpha angle beta angle gamma
43.691 47.326 68.019 90.00 100.24 90.00
method X-Ray Diffractionresolution 2.00 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (4nac.pdb1.gz) 26 Kb
  • Biological Unit Coordinates (4nac.pdb2.gz) 24 Kb
  • CSU: Contacts of Structural Units for 4NAC
  • Structure Factors (239 Kb)
  • Retrieve 4NAC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4NAC from S2C, [Save to disk]
  • Re-refined 4nac structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4NAC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4NAC
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4NAC, from MSDmotif at EBI
  • Fold representative 4nac from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4nac_A] [4nac] [4nac_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4NAC: [RPR ] by SMART
  • Other resources with information on 4NAC
  • Community annotation for 4NAC at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science