4NEV Crystal structure of Trypanothione Reductase from Trypanosoma brucei in complex with inhibitor EP127 (5-{5-[1-(PYRROLIDIN-1-YL)CYCLOHEXYL]-1,3-THIAZOL-2-YL}-1H-INDOLE) date
authors Persch, E., Bryson, S., Pai, E.F., Krauth-Siegel, R.L., Diederich, F.
compound source
symmetry
R_factor
R_Free 0.258
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand 2JR, EPE, FAD, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • thioredoxin-disulfide reduct...


  • Primary referenceBinding to Large Enzyme Pockets: Small-Molecule Inhibitors of Trypanothione Reductase., Persch E, Bryson S, Todoroff NK, Eberle C, Thelemann J, Dirdjaja N, Kaiser M, Weber M, Derbani H, Brun R, Schneider G, Pai EF, Krauth-Siegel RL, Diederich F, ChemMedChem. 2014 Apr 30. doi: 10.1002/cmdc.201402032. PMID:24788386
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (163 Kb) [Save to disk]
  • Biological Unit Coordinates (4nev.pdb1.gz) 156 Kb
  • LPC: Ligand-Protein Contacts for 4NEV
  • CSU: Contacts of Structural Units for 4NEV
  • Structure Factors (2884 Kb)
  • Retrieve 4NEV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4NEV from S2C, [Save to disk]
  • Re-refined 4nev structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4NEV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4NEV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4NEV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4nev_B] [4nev_A] [4nev]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4NEV
  • Community annotation for 4NEV at PDBWiki (http://pdbwiki.org)

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