4NI2 Crystal structure of the heterodimeric catalytic domain of wild-type human soluble guanylate cyclase date
authors Seeger, F., Williams, G.J., Tainer, J.A., Garcin, E.D.
compound source
symmetry
R_factor
R_Free 0.1996
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
ligand EDO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceInterfacial residues promote an optimal alignment of the catalytic center in human soluble guanylate cyclase: heterodimerization is required but not sufficient for activity., Seeger F, Quintyn R, Tanimoto A, Williams GJ, Tainer JA, Wysocki VH, Garcin ED, Biochemistry. 2014 Apr 8;53(13):2153-65. doi: 10.1021/bi500129k. Epub 2014 Mar, 26. PMID:24669844
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (194 Kb) [Save to disk]
  • Biological Unit Coordinates (4ni2.pdb1.gz) 185 Kb
  • LPC: Ligand-Protein Contacts for 4NI2
  • CSU: Contacts of Structural Units for 4NI2
  • Structure Factors (231 Kb)
  • Retrieve 4NI2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4NI2 from S2C, [Save to disk]
  • Re-refined 4ni2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4NI2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4NI2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4NI2, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ni2_B] [4ni2_A] [4ni2]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4NI2: [CYCc ] by SMART
  • Other resources with information on 4NI2
  • Community annotation for 4NI2 at PDBWiki (http://pdbwiki.org)

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