4NI7	Crystal structure of human interleukin 6 in complex with a modified nucleotide aptamer (SOMAMER SL1025)	date	2013-11-05
authors	Davies, D., Edwards, T., Gelinas, A., Jarvis, T., Clifton, M.C.
compound		source
symmetry		R_factor R_Free 0.260
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.40
ligand	2JU, A2M, DUZ, NA, OMC, OMG, UPE	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal Structure of Interleukin-6 in Complex with a Modified Nucleic Acid Ligand., Gelinas AD, Davies DR, Edwards TE, Rohloff JC, Carter JD, Zhang C, Gupta S, Ishikawa Y, Hirota M, Nakaishi Y, Jarvis TC, Janjic N, J Biol Chem. 2014 Jan 12. PMID:24415767

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk] Biological Unit Coordinates (4ni7.pdb1.gz) 77 Kb LPC: Ligand-Protein Contacts for 4NI7 CSU: Contacts of Structural Units for 4NI7 Structure Factors (219 Kb) Retrieve 4NI7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4NI7 from S2C, [Save to disk] Re-refined 4ni7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4NI7 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4NI7

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4NI7, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ni7] [4ni7_B] [4ni7_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4NI7: [IL6 ] by SMART

Other resources with information on 4NI7

Community annotation for 4NI7 at PDBWiki (http://pdbwiki.org)

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