4NJ8 Structural Protein date Nov 08, 2013
title Crystal Structure Of The Human Anks3 Sam Domain L52a Mutant
authors C.N.Leettola, D.Cascio, J.U.Bowie
compound source
Molecule: Ankyrin Repeat And Sam Domain-Containing Protein
Chain: A, B
Fragment: Sam Domain, Unp Residues 421- 490
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Anks3, Kiaa1977
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta(De3)Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Phis-Sumo
symmetry Space Group: P 41
R_factor 0.198 R_Free 0.218
length a length b length c angle alpha angle beta angle gamma
71.890 71.890 33.540 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.60 Å
Primary referenceCharacterization of the SAM domain of the PKD-related protein ANKS6 and its interaction with ANKS3., Leettola CN, Knight MJ, Cascio D, Hoffman S, Bowie JU, BMC Struct Biol. 2014 Jul 7;14(1):17. PMID:24998259
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (4nj8.pdb1.gz) 24 Kb
  • Biological Unit Coordinates (4nj8.pdb2.gz) 22 Kb
  • CSU: Contacts of Structural Units for 4NJ8
  • Structure Factors (150 Kb)
  • Retrieve 4NJ8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4NJ8 from S2C, [Save to disk]
  • Re-refined 4nj8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4NJ8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4NJ8
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4NJ8, from MSDmotif at EBI
  • Fold representative 4nj8 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4nj8_A] [4nj8_B] [4nj8]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4NJ8: [SAM ] by SMART
  • Other resources with information on 4NJ8
  • Community annotation for 4NJ8 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science