4NKD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceEffects of protein engineering and rational mutagenesis on crystal lattice of single chain antibody fragments., Kalyoncu S, Hyun J, Pai JC, Johnson JL, Entzminger K, Jain A, Heaner DP Jr, Morales IA, Truskett TM, Maynard JA, Lieberman RL, Proteins. 2014 Feb 26. doi: 10.1002/prot.24542. PMID:24615866
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (151 Kb) [Save to disk]
  • Biological Unit Coordinates (4nkd.pdb1.gz) 39 Kb
  • Biological Unit Coordinates (4nkd.pdb2.gz) 39 Kb
  • Biological Unit Coordinates (4nkd.pdb3.gz) 39 Kb
  • Biological Unit Coordinates (4nkd.pdb4.gz) 39 Kb
  • CSU: Contacts of Structural Units for 4NKD
  • Structure Factors (348 Kb)
  • Retrieve 4NKD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4NKD from S2C, [Save to disk]
  • Re-refined 4nkd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4NKD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4nkd] [4nkd_A] [4nkd_B] [4nkd_C] [4nkd_D] [4nkd_E] [4nkd_F] [4nkd_G] [4nkd_H]
  • SWISS-PROT database:
  • Domain found in 4NKD: [IGv ] by SMART

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