4NQF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MSE enzyme
Primary referenceDimerization of VirD2 Binding Protein Is Essential for Agrobacterium Induced Tumor Formation in Plants., Padavannil A, Jobichen C, Qinghua Y, Seetharaman J, Velazquez-Campoy A, Yang L, Pan SQ, Sivaraman J, PLoS Pathog. 2014 Mar 13;10(3):e1003948. doi: 10.1371/journal.ppat.1003948., eCollection 2014 Mar. PMID:24626239
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (4nqf.pdb1.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 4NQF
  • CSU: Contacts of Structural Units for 4NQF
  • Structure Factors (107 Kb)
  • Retrieve 4NQF in mmCIF format [Save to disk]
  • Re-refined 4nqf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4NQF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4nqf] [4nqf_A] [4nqf_B]
  • SWISS-PROT database:
  • Domain found in 4NQF: [HEPN ] by SMART

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